BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018A02SP1|AL427234
(690 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1762 381 e-105
3x_Contig1471 280 4e-75
>3x_Contig1762
Length = 22098
Score = 381 bits (192), Expect = e-105
Identities = 192/192 (100%)
Strand = Plus / Minus
Query: 1 attacaaagttttcaaatttgtacttaaattttcccttctattcaatatacttctttgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 attacaaagttttcaaatttgtacttaaattttcccttctattcaatatacttctttgtg 147
Query: 61 catcttcagttatatagttcatatttaaggtttaattcctagcaattccacactaacgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 catcttcagttatatagttcatatttaaggtttaattcctagcaattccacactaacgct 87
Query: 121 tttctaatttgtgatcttacaacccgtcaagatagtcggacttcaatatcttcctccaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 tttctaatttgtgatcttacaacccgtcaagatagtcggacttcaatatcttcctccaca 27
Query: 181 cagtagaaccat 192
||||||||||||
Sbjct: 26 cagtagaaccat 15
>3x_Contig1471
Length = 8032
Score = 280 bits (141), Expect = 4e-75
Identities = 141/141 (100%)
Strand = Plus / Plus
Query: 550 tatctaataagttgactactgctaccgaactgtcagatgatttggatgctgctacccagc 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatctaataagttgactactgctaccgaactgtcagatgatttggatgctgctacccagc 60
Query: 610 tggcagaggctaaaaagaaagttacagcagccaatgatacacaattacagaaatatatcg 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggcagaggctaaaaagaaagttacagcagccaatgatacacaattacagaaatatatcg 120
Query: 670 aagaacaagaccccatgatca 690
|||||||||||||||||||||
Sbjct: 121 aagaacaagaccccatgatca 141
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5515
Number of Sequences: 1807
Number of extensions: 5515
Number of successful extensions: 115
Number of sequences better than 1.0e-20: 2
length of query: 690
length of database: 10,358,551
effective HSP length: 16
effective length of query: 674
effective length of database: 10,329,639
effective search space: 6962176686
effective search space used: 6962176686
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)